PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678431367
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family TCP
Protein Properties Length: 412aa    MW: 44566.3 Da    PI: 6.972
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678431367genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP116.73e-3634140289
        TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............ssssasec..eaesssssasnss 86 
                +g+kdrhsk++T++g+RdRRvRl a++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el+++             + + +++c  e+++++       
  678431367  34 TGRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKTAIDELAQLppwhplpqnvnfeQDEVQKKCeeEQQQQV------- 126
                79**************************************************************88877765554432222244431111111....... PP

        TCP  87 sg............k 89 
                 +            +
  678431367 127 -KlgvhhgepvisaA 140
                .02222223355331 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.9E-3334143IPR005333Transcription factor, TCP
PROSITE profilePS5136933.0333694IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009733Biological Processresponse to auxin
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0009965Biological Processleaf morphogenesis
GO:0030154Biological Processcell differentiation
GO:0045962Biological Processpositive regulation of development, heterochronic
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    Send to blast
MGESSNHRAA PPPSRLGPRS EIVEVQGGHV VRSTGRKDRH SKVCTAKGPR DRRVRLAAHT  60
AIQFYDVQDR LGYDRPSKAV DWLIKKAKTA IDELAQLPPW HPLPQNVNFE QDEVQKKCEE  120
EQQQQVKLGV HHGEPVISAA SSKRPMIMLG GDNELHNNPS SQNSGFLPSS FDSDAIADTM  180
KSFIPMGASA QASSSPMQFH RFPTSDLLSG NSGNSQDLRL SLQSFQDPIL LHHQAPEQPH  240
QQGQSLLGFD GTPNWLEHHP QAAAAAELSR FQRLIAWNPG GGDSNNGNGG AAAGFLFSSQ  300
QPTLQQLFGH AHFSSQRGPL QSSNTPSIRA WMDPSGVAAA IASSDPSPQQ QQHHQLLPTV  360
VPIYPSSMQG IGFASGAGGF AGFPIPTRIQ GDPEEHDGYS DKPSSVSSDS RH
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00062PBMTransfer from AT3G15030Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082737.10.0PREDICTED: transcription factor TCP4-like
RefseqXP_011082738.10.0PREDICTED: transcription factor TCP4-like
SwissprotQ8LPR58e-92TCP4_ARATH; Transcription factor TCP4
TrEMBLA0A0M5L3G71e-160A0A0M5L3G7_9LAMI; TCP transcription factor CIN2A
STRINGPGSC0003DMT4000397861e-127(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32072349
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.33e-78TCP family protein